ImageCLEFmed 2005 and 2006 Data

Last updated - 27 December 2006, William Hersh

The data for the ImageCLEFmed 2005 and 2006 tasks are available in the protected area of the Web site as described in the email sent to participants. The directory for the data contains the following files:

-rw-r--r--   1379880960 Jan 25  2006 CASImage.tar
-rw-r--r--         1161 Feb  6  2006 DataCheck.java
-rw-r--r--     20410633 Apr  1  2006 Imageclefmed.xml
-rw-r--r--     66324480 Jan 25  2006 MIR.tar
-rw-r--r--    921692160 Jan 25  2006 PathoPic.tar
-rw-r--r--   2682972160 Apr  1  2006 Peir.tar
-rw-r--r--   1000000000 Apr  1  2006 Peir.tar_aa
-rw-r--r--   1000000000 Apr  1  2006 Peir.tar_ab
-rw-r--r--    682972160 Apr  1  2006 Peir.tar_ac
-rw-r--r--         2435 Apr  1  2006 README
-rw-------      2890870 Dec 27 09:21 iclefmed2005images.zip
-rw-------       180224 Dec 27 09:21 iclefmed2005topics.doc
-rw-------         4981 Dec 27 09:21 iclefmed2005topics.txt
-rw-------      7064320 Dec 27 09:21 iclefmed2006images.zip
-rw-------      7328256 Dec 27 09:21 iclefmed2006topics.doc
-rw-------         4865 Dec 27 09:21 iclefmed2006topics.txt
-rw-------       634876 Dec 27 09:24 icm05.qrels.lenient.txt
-rw-------       634876 Dec 27 09:22 icm05.qrels.txt
-rw-r--r--       801653 Jul 28 05:57 icm06.qrels.txt
-rw-r--r--          858 Apr  1  2006 updatePeir.java
-rw-------          234 Dec 27 09:22 topic#conversion.txt

The README files describes how to extract the collection from the .tar files. Here is a description of the files:

Images

CASImage
MIR
PathoPic
Peir - also split into three files for systems that cannot handle >2 GB files

Image Annotations (metadata)

Imageclefmed.xml

Topics

From 2005: iclefmed2005*
From 2006: iclefmed2006*

Note: the 2006 files have some corrections in the German topics from the originally released topic files

Relevance judgments

icm05.qrels.txt - official qrels; only definitely relevant designated as relevant
icm05.qrels.lenient.txt - definitely and possibly relevant designated as relevant
icm06.qrels.txt - official qrels; definitely and possibly relevant designated as relevant

Utilities

DataCheck.java
updatePeir.java
topic#conversion.txt

Organisers

Henning Müller, University and Hospitals of Geneva, Switzerland	Email: henning.mueller@sim.hcuge.ch Web: http://www.sim.hcuge.ch/medgift/02_Henning_EN.htm
Paul Clough, Sheffield University, UK	Email: p.d.clough@sheffield.ac.uk Web: http://ir.shef.ac.uk/cloughie/
William Hersh, Oregon Health &Science University (OHSU), Portland, OR, USA	Email: hersh@ohsu.edu Web: http://www.billhersh.info/